genomic selection

DEM

A multi-modal deep-learning architecture designed to extract representative features from heterogeneous omics datasets, enabling the prediction of complex trait phenotypes.

Dual-Extraction Modeling: A multimodal deep learning architecture for phenotypic prediction and functional gene mining of complex traits

Despite considerable advances in extracting crucial insights from bio-omics data to unravel the intricate mechanisms underlying complex traits, the absence of a universal multi-modal computational tool with robust interpretability for accurate …

Genome optimization via virtual simulation to accelerate maize hybrid breeding

The employment of doubled-haploid (DH) technology in maize has vastly accelerated the efficiency of developing inbred lines. The selection of superior lines has to rely on genotypes with genomic selection (GS) model, rather than phenotypes due to the …

GOVS

Genome optimization via virtual simulation to accelerate maize hybrid breeding

A deep convolutional neural network approach for predicting phenotypes from genotypes

Deep learning is a promising technology to accurately select individuals with high phenotypic values based on genotypic data. Genomic selection (GS) is a promising breeding strategy by which the phenotypes of plant individuals are usually predicted …

DeepGS

Deep learning-based genomic selection

An Effective Strategy for Trait Combinations in Multiple-Trait Genomic Selection

Multiple-trait genomic selection (MTGS) is a recently developed method of genomic selection for satisfying the requirements of actual breeding, which usually aims to improve multiple traits simultaneously. Although many efforts have been made to …

Application of Machine Learning-Based Classification to Genomic Selection and Performance Improvement

Genomic selection (GS) is a novel breeding strategy that selects individuals with high breeding value using computer programs. Although GS has long been practiced in the field of animal breeding, its application is still challenging in crops with …